Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDA--VNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
2BQY Chain:A ((4-170))
---EKLEVSHDADSLCVVIEISKHSN-IKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQ
General information:
TITO was launched using:
RESULT:
Template:
2BQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88377 for 1265 contacts (-69.9/contact) +
2D Compatibility (PS) -18151 + (NN) -6495 + (LL) 168
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -130905.0 ( -103.48 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2BQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BQY-query.scw
PDB file :
Tito_Scwrl_2BQY.pdb
: