Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIYCITK---ADNGGAQTHLIQLANHFCVHHDVYVIV-----GNHGPMIEQLDA------RVNVIILEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTV------GRIAKFISKSKDTRVV-------------FTAHGWAFTEGVKPAKKFLYLVI--EKLMSCITDSI---------ICV----SDFDKQLALKYRFNRLKLTT------IHNGIADVPAVKQTL-------------------------KSQSH--NNIGEVVGML--PNKQDLQINA-----------------------PTKHQFVMIARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVG-GISELVAD--NGICMMNNQPETIAKVLEKYLI-DSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
4X7P Chain:A ((1-493)) | MKKIFMMVHELDVNKGGMTSSMFNRSKEFYDADIPADIVTFDYKGNYDEIIKALKKQGKMDRRTKMYNVFEYFKQISNNKHFKSNKLLYKHISERLKNTIEIEESKGISRYFDITTGTYIAYIRKSKSEKVIDFFKDNKRIERFSFIDNKVHMKETFNVDNKVCYQVFYDEKGYPYISRNINANNGAVGKTYVLVNKKEFKNNLALCVYYLEKLIKDSKDSIMICDGPGSFPKMFNTNHKNAQKYGVIHVNHHENFDDTGAFKKSEKYIIENANKINGVIVLTEAQRLDILNQFDVENIFTISNFVKIHNAPKHFQTEKIVGHISRMVPTKRIDLLIEVAELVVKKD-NAVKFHIYGEGSVKDKIAKMIEDKNLERNVFLKGYTTTPQKCLEDFKLVVSTSQYEGQGLSMIEAMISKRPVVAFDIKYGPSDFIEDNKNGYLIENHNINDMADKILQLVNNDVLAAEFGSKARENIIEKYSTESILEKWLNLFNS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4X7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209704 for 2663 contacts (-78.7/contact) +
2D Compatibility (PS) -42465 + (NN) -15179 + (LL) 180
1D Compatibility (HY) -24000 + (ID) 4500
Total energy: -295668.0 ( -111.03 by residue)
QMean score : 0.318
|
|
|