Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKE------------------EELESALLKADFIVHLAGVNRP---EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIAR-NEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV |
| 3EHE Chain:A ((3-264)) | -LIVVTGGAGFIGSHVVDKLSESN-E-IVVIDNLSSGNEEFVNEAARLVKADLAADDIKDYLKGAEEVWHIAANPDVRGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHG---VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDER--VNIFNIGSEDQIKVKRIAEIVCEELGLSP----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102593 for 1633 contacts (-62.8/contact) +
2D Compatibility (PS) -22088 + (NN) -3961 + (LL) 8288
1D Compatibility (HY) -16000 + (ID) 2250
Total energy: -138604.0 ( -84.88 by residue)
QMean score : 0.566
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