Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQL--------------------WKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQ-----TPMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCPG----NFQRLMQLS-K--RLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKM-SLVIADIMDETTTKDKA |
| 2B69 Chain:A ((27-330)) | -RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLLLASTSEVYGDPEVH----PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ-------------DDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115088 for 2225 contacts (-51.7/contact) +
2D Compatibility (PS) -29072 + (NN) -8972 + (LL) 1492
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -159540.0 ( -71.70 by residue)
QMean score : 0.462
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