Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQSSKQQTPKIKKGGNLKPLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQN-----KHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVA-TMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPN---EFNGAVFINENVRNFLKQNIEDIHFANDDQPNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDNNNSDNPDAA |
| 2AS9 Chain:A ((2-202)) | ------------------------------------------------------------------------EKNVTQVKDTNNFPYNGVVSF--------KDATGFVIGKNTIITNKHVSKDYKV-GDRITAHPNGDK---GNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHI---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57953 for 1633 contacts (-35.5/contact) +
2D Compatibility (PS) -21016 + (NN) -12124 + (LL) 376
1D Compatibility (HY) -13200 + (ID) 3000
Total energy: -106917.0 ( -65.47 by residue)
QMean score : 0.456
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