Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
3L93 Chain:A ((6-161))
---TKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKL-
General information:
TITO was launched using:
RESULT:
Template:
3L93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105909 for 1222 contacts (-86.7/contact) +
2D Compatibility (PS) -16706 + (NN) -5871 + (LL) 420
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -146616.0 ( -119.98 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3L93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L93-query.scw
PDB file :
Tito_Scwrl_3L93.pdb
: