Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
1X3O Chain:A ((8-78))
----EKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAK--
General information:
TITO was launched using:
RESULT:
Template:
1X3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32334 for 477 contacts (-67.8/contact) +
2D Compatibility (PS) -7791 + (NN) -2713 + (LL) 532
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -51306.0 ( -107.56 by residue)
QMean score : 0.838
(partial model without unconserved sides chains):
PDB file :
Tito_1X3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3O-query.scw
PDB file :
Tito_Scwrl_1X3O.pdb
: