Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEAL-TYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQ--PVCKVCGSQIETKIIATRNSHYCPVCQK |
1K82 Chain:A ((1-268)) | -PELPEVETSRRGIEPHLVGATILHAVVRN----------GRLRW--PVSEEIYRLSDQPVLSVQRRAKYLLLELPE----GWIIIHLGMSGSLRILPEEL-----PPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKC---AKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK--------PGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124674 for 2105 contacts (-59.2/contact) +
2D Compatibility (PS) -26984 + (NN) -8185 + (LL) 2044
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -178549.0 ( -84.82 by residue)
QMean score : 0.323
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