Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMK-QKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISS-NASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE
3MX6 Chain:B ((8-246))
--IHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVG--DVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIGRVFHDKPS-ILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDG----------
General information:
TITO was launched using:
RESULT:
Template:
3MX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74132 for 2015 contacts (-36.8/contact) +
2D Compatibility (PS) -26379 + (NN) -13563 + (LL) 1456
1D Compatibility (HY) -18400 + (ID) 4200
Total energy: -135218.0 ( -67.11 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_3MX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MX6-query.scw
PDB file :
Tito_Scwrl_3MX6.pdb
: