Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2ORV Chain:A ((18-191))
------RGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY------------MEALPACLLRDVAQE-ALGVAVIGIDEGQFFPD-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGT------EKEVEVIGGADKYHSVCRLCYFK----------
General information:
TITO was launched using:
RESULT:
Template:
2ORV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101252 for 1316 contacts (-76.9/contact) +
2D Compatibility (PS) -17531 + (NN) -8919 + (LL) 1456
1D Compatibility (HY) -15200 + (ID) 3300
Total energy: -144746.0 ( -109.99 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2ORV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORV-query.scw
PDB file :
Tito_Scwrl_2ORV.pdb
: