Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MKQIKALAL-FSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKPKYGY-------GKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQ------VRKLVREVGEEARFDLILDRTQASGE----------KPQFLDELLL-RPMSAKLLE-------------------------------------PTFMEKKGWVDREKLLDVSGRGRARQ----LQMIKD-----YGLKYYEKPGGGCLLTDIQVSNKI----KNLKEYREMVFEDGVIVKNGRYF---VLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDK---NASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA------- |
1K92 Chain:A ((1-444)) | TTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSAASGVPQVENLENK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16360 for 2581 contacts (-6.3/contact) +
2D Compatibility (PS) -36130 + (NN) 2894 + (LL) 0
1D Compatibility (HY) 4000 + (ID) 2750
Total energy: -48346.0 ( -18.73 by residue)
QMean score : 0.219
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