Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKKT----------KNPQLIDKGKELFESMGCAGCHGNDGKGLQE-----------------------------NQVFAADLTTYG---------TESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 3O5C Chain:A ((143-293)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDRLTDAIAAFEKT-LVTPNSPFDQYLLGKQDAISGDAKAGYQLFKDKGCVSCHNGPAVGGTMFMKMGLIKPFHTNNPAEGRKGVTGKDADKFVFKVPTLRNIELTYPYFHDGSVWTLEEAVNTM----ADIQLG---QKLTEKETKEMVAFLNSLTGEQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18265 for 660 contacts (-27.7/contact) +
2D Compatibility (PS) -11055 + (NN) -7095 + (LL) 12548
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -26017.0 ( -39.42 by residue)
QMean score : 0.401
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