Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFD-MIKQRNPN---FDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTP-EFKAMMEAV-------------------------------KKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTED-----------EAKRIISEID-KQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQM---APDFSKAAFALTPGDYTKTPVKTE-FGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
| 3NRK Chain:A ((50-343)) | ----------------------------------------LNRVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQ---LKIAVPPPNEQEIRSWYNQNKDKV--GFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADP------SSFALIAGSPRNDPALRA--RRGMVEWISSFDLYKYSKITATIAAPLPNGGVS-EVFRDERKRYCILKIEGKRP---TPMENLRGGIQNILYRDKEEDTFHRWLKESRAEIPIQIFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24095 for 1623 contacts (-14.8/contact) +
2D Compatibility (PS) -26797 + (NN) -14906 + (LL) 3920
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -72728.0 ( -44.81 by residue)
QMean score : 0.493
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