Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKKCRHLLQTSDLSLDEIKLLLNKAS-VYANDFNAVSLETREKMQDKIIVALFFENSTRTVSSFEIASLRLGAKIVKLN--MQTSSTSKGETLIDTFKNIHAMQPDAIITRHAFSSAPFKLAEFS-QCPLINAGSGTSAHPTQALLDLLTLYRHFGSLENLKGKKIAFIGDVKNSRVANSNIKLLQRL-GLEIMLCAPSSM-LPITPLK---------TTH-NIEEAIGFADILMSLRTQTERHNAPIFASLKDYGNAYCITQKRLETHAKNKEVIILHPGPVHRDIDIESAVLEDKRSKVLEQVKNGVAMRMAVLEFLLLD |
| 4F04 Chain:A ((3-304)) | -PLYQKHIISINDLSRDDLNLVLATAAKLKAN-------PQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVI-STYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNL---HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVK---AQFVLRASDLHNAKANMKV--LHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142294 for 2445 contacts (-58.2/contact) +
2D Compatibility (PS) -31005 + (NN) -14228 + (LL) 1156
1D Compatibility (HY) -17200 + (ID) 5400
Total energy: -208971.0 ( -85.47 by residue)
QMean score : 0.412
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