Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKSCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATIILKTSLGLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLTLQQILFKREEW
2CG8 Chain:A ((114-253))
----------------TIHRRKQRAFIALGSNMGDKQANLKQAIDKLRAR-GIHILKESSVLA----------SFANQVVEVETWLPAQDLLETLLAIESELGR------------IDLDLLFVEDQILYTDDLILPHPYIAERLFVLESLQEIAPHFIHPIL
General information:
TITO was launched using:
RESULT:
Template:
2CG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102452 for 873 contacts (-117.4/contact) +
2D Compatibility (PS) -12496 + (NN) -4790 + (LL) 1764
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -125624.0 ( -143.90 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_2CG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CG8-query.scw
PDB file :
Tito_Scwrl_2CG8.pdb
: