Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFYTYSGETAAEALKIAQSHHGVDTLVFKTQEIRKKTLTSSGLYEIVVAVEEEENKKAPLIPESLYDEELNEEDVVMQLSSTVEEMRKLAGVSSNQRNYTFSKNKTLLEKDAPLEDTPLEANKQDALLQALKDEANHKKEREKREVKQEEEIKDINAQLSKIRDSLKLIQNMFWDEKNPNSVNIPQEFAEIYKLAKQSGMKSSHLDEIMQLSLELMPLRMRENSVTIKRYF-REVLRKIILCR--PEDLNLRQKRILMLVGPTGVGKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVIDA-----KDFAKEIEAL--EYCDFILVDTTGHSQYDKEKIAGLKEFIDG------GYNIDVSLVLSVTTKYEDMKDIYDSFGVLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMDLKVATNEYLVDCMLDGFSNPNKEQA |
| 2OG2 Chain:A ((88-359)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAK--KTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLK---NEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAV-EDLQPFDPEAFVNAIFS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131593 for 2074 contacts (-63.4/contact) +
2D Compatibility (PS) -27243 + (NN) -11910 + (LL) 14472
1D Compatibility (HY) -12000 + (ID) 3350
Total energy: -171624.0 ( -82.75 by residue)
QMean score : 0.543
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