Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNGLEEKGYKAAVIKFDAASESDFVEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIENNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM
4BO4 Chain:A ((23-268))
MSLQGKVALVTGASRGIGQAIALELGRLG-AVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNA--------------EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112778 for 1972 contacts (-57.2/contact) +
2D Compatibility (PS) -25208 + (NN) -8031 + (LL) 1492
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -167475.0 ( -84.93 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4BO4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO4-query.scw
PDB file :
Tito_Scwrl_4BO4.pdb
: