Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESIHHLRQKN
3ABF Chain:A ((1-63))
MVVLKVTLLE---GRPPEKKRELVRRLTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVLFSDKEGT-
General information:
TITO was launched using:
RESULT:
Template:
3ABF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17295 for 345 contacts (-50.1/contact) +
2D Compatibility (PS) -7186 + (NN) -3335 + (LL) -84
1D Compatibility (HY) -5600 + (ID) 650
Total energy: -34150.0 ( -98.99 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3ABF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ABF-query.scw
PDB file :
Tito_Scwrl_3ABF.pdb
: