Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQ--------YDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPA-QNLEVLRRIDEIV-----ALGYEVLLGTSRKSTIGLVLGTTPG-DRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL |
| 2Y5S Chain:A ((24-274)) | ----------LVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYKPAVMRAALAAGADLINDIWG-FRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121119 for 1903 contacts (-63.6/contact) +
2D Compatibility (PS) -24921 + (NN) -16454 + (LL) 2632
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -178262.0 ( -93.67 by residue)
QMean score : 0.508
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