Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAESLITKKAIAGGLMELCQ-HKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGIT--L-G----NWDKHVLKMLESIKENADFYKNTVSAD-A-SI-LSFCF---SKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEA------PETIANQLFRLAKDTEFLANSMYREN
3LSJ Chain:A ((8-201))
--QKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRN-ELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGG-----------
General information:
TITO was launched using:
RESULT:
Template:
3LSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90518 for 1137 contacts (-79.6/contact) +
2D Compatibility (PS) -17608 + (NN) -4381 + (LL) 1052
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -115955.0 ( -101.98 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_3LSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LSJ-query.scw
PDB file :
Tito_Scwrl_3LSJ.pdb
: