Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MYEKARQMMIEA---HSGQVRKITGEPYFSHPLN----VARILRRAGFREEVVVAGLLHDAVE-----DTEMTDADIR-ATFGDEVADLVASHTENKT---LSWEE-----RKAHTIEQVRTGNLEEKAL-----------IVAD----------KLDNLTSVKYALSSEGKS---VWSYFKRGYD-----------LQKWYNQGIKNNMEYGLNPSEIPPFFDEYARLVKWIFKK----------------------------- |
4I5J Chain:A ((8-279)) | NHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18188 for 1067 contacts (-17.0/contact) +
2D Compatibility (PS) -18601 + (NN) -1281 + (LL) 0
1D Compatibility (HY) -13600 + (ID) 1450
Total energy: -53120.0 ( -49.78 by residue)
QMean score : 0.269
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