Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MTKSIRPELRDIQVSGIRTFNTRVTGIPDMIRLTLGEPDFPTPDHVKQAAISAIEEN--FTNYTPNAGMPELLEAASIYFHEKYD-LSYSNKEIIVTVGATEAISVALQTILEPGDEVILPDPIYPGYEPLITLN----KAHPVKVDTTETNFKLTPEQLKAHITPKTKALIIPYPSNPTGVTLSKDELSALAEVLKETGIFVIADEIYSELTY--HEEHVSIAPMLRD----QTIVINGLSKSHAMIGWRIGFLLAPEILTQEMLKIHQYSVTCASSISQKAALEAI---TNGKDDAFQMRTEYKTRANFTQDRLEKMG-----FTVIPPDGAFYFFVKLPDEI--AENSFDWAVKLAEEAKVAVVPGNAFSEKGDRYFRLSYATSFNNLAEALDRMAQFVEK |
| 1BJW Chain:A ((1-382)) | MRGLSRRVQAMK---PSATVAVNAKALELRRQ----GVDLVALTAGEPDFDTPEHVKEAARRALA--QGKTKYAPPAGIPELREALAEKFRRENGL-SVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRF-AGGV-VVEVET-LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG--EHFSPGR----VAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV----RPSGAFYVLMDTS---PIAPDEVRAAERLLE-AGVAVVPGTDFAA--FGHVRLSYATSEENLRKALERFARVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211888 for 3015 contacts (-70.3/contact) +
2D Compatibility (PS) -39349 + (NN) -27439 + (LL) 1880
1D Compatibility (HY) -20400 + (ID) 6700
Total energy: -303896.0 ( -100.79 by residue)
QMean score : 0.547
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