Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE
3MPW Chain:K ((2-87))
----EALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFP----
General information:
TITO was launched using:
RESULT:
Template:
3MPW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42633 for 660 contacts (-64.6/contact) +
2D Compatibility (PS) -9651 + (NN) -3272 + (LL) 700
1D Compatibility (HY) -10400 + (ID) 3000
Total energy: -68256.0 ( -103.42 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_3MPW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MPW-query.scw
PDB file :
Tito_Scwrl_3MPW.pdb
: