Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VHNPNLFNTLKQNEYTLPKDPNTSNEIIDTMLSYLSSTDSELRDNIAYNIFSEWLVVQDNLTTEQKMRIYNYAVNKNNLLFKINIIDSDAVFQRSFLALIIALLLENNKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELIYQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDERLSNILITALFEQKISNEEVKNWLISISETIPSYLPEIPLINIKQFTQTLLIKLTVLNYDVDFSLFPIVTRYIRKNDDNSTNKKAL |
| 1VF6 Chain:C ((120-170)) | -----------------------------------------------------------------------------------------------QDPDVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVT-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15904 for 262 contacts (-60.7/contact) +
2D Compatibility (PS) -5614 + (NN) -5309 + (LL) 17248
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -12079.0 ( -46.10 by residue)
QMean score : 0.502
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