Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTT---------------YGNEVVQQLTFKKILEDKY-----TVTEKEVNAEYKKYEEQYGD----SFESTLSS-NNLTKTSFKENLEYNLLVQKATEA---NMDVSESKLKAYYKTWE----PDITVRHILVDDEA-----------TAKEIQTKLK-NGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEM---DETFEKAAYALENKDDVSGIVKST-YGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
| 3NRK Chain:A ((52-351)) | ------------------------RVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQLKIAVPPPNEQEIRSWYNQNKDKVGFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPLP-NGGVSEVFRDERKRYCILKIEGKRP-TPMENLRGGIQNILYRDKEE-DTFHRWLKESRAEIPIQIFDEAYRKENK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11847 for 1662 contacts (-7.1/contact) +
2D Compatibility (PS) -27135 + (NN) -11163 + (LL) 2476
1D Compatibility (HY) -12800 + (ID) 2050
Total energy: -62519.0 ( -37.62 by residue)
QMean score : 0.617
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