Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLRGILPFAHDTLRKVVRSGDYVVDATCGNGHDTLLLAELVGINGHVLGFDIQQLAIDATNTRLENAGVSSQVELVCASHARIPEYTSKPVRAAIFNLGYLPGGDKEITTTADSTLESIGHLMELLEVGGVIILVIYHGHPAGKQEKDAVMTFCEAIPQQDFHVLSYNFINQKNDAPFVIIIEKRKPRQS----
3EEY Chain:A ((3-197))
LTIKNSLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEKISEGHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
3EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167998 for 1538 contacts (-109.2/contact) +
2D Compatibility (PS) -20984 + (NN) -10429 + (LL) 0
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -221461.0 ( -143.99 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EEY-query.scw
PDB file :
Tito_Scwrl_3EEY.pdb
: