Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNE--TVTIVPGEKHIFWTDIKSYMQE-DEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGNIGIAIKNFSNEPVSIEAGERVAQGVFQKYLVADTDI----VANESRVGGVGSTGR
3TQZ Chain:A ((15-141))
--------------KRLGSEFPLPAYATTGSAGLDLRACLDEPLKIEPDETCLISTGLAIYLGHSNVAATILPRSGLGHKHGIVLGNLVGLIDSDYQ------GPLMVSCWNRGKEPYTINPGDRIAQLVVLPILKAQFAVVEEFEL-------------
General information:
TITO was launched using:
RESULT:
Template:
3TQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43001 for 800 contacts (-53.8/contact) +
2D Compatibility (PS) -12808 + (NN) -1146 + (LL) 560
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -65095.0 ( -81.37 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_3TQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQZ-query.scw
PDB file :
Tito_Scwrl_3TQZ.pdb
: