Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLGIMGTNWITDSFIEGAINSG--EWNLTAVYSRTEEKARAFGEKYGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAELEHAHQIARENNVFLFEAARHIQEPNFKRLQENIE--KVGTIHGATLAYMKYSSRYDQVLNGEEPNIFSLKFSGGSIVDLGVYPLYSAITLFGE--PVKATYFATKLPTGVDGLGPIILEYPTF-NITIIQGKNSQSFLPSEIYGQKGTLIVDPLT-GIEKITFYDNATKEE----TELAGPVVANDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK |
| 3OHS Chain:X ((3-332)) | LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNLTHV--------PRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDDTVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVRRAIGVTFPQD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138627 for 2828 contacts (-49.0/contact) +
2D Compatibility (PS) -34127 + (NN) -10534 + (LL) 432
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -194856.0 ( -68.90 by residue)
QMean score : 0.478
|
|
|