Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRFE-PGEVQQVFVGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
3AKE Chain:A ((1-207))
--MRGIVTIDGPSASGKSSVARRVAAALGVPYLSSGLLYRAAAFLALRAGVDPGDEEGLLALLEGLGVRLLAQAEGNRVLADGEDLTSFLHTPEVDRVVSAVARLPGVRAWVNRRLK--EVPPPFVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRARERPQ-----AYEEVLRDLLRRDERD------QSAPAPDALVLDTGGMTLDEVVAWVLAHIR-----
General information:
TITO was launched using:
RESULT:
Template:
3AKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122921 for 1690 contacts (-72.7/contact) +
2D Compatibility (PS) -22258 + (NN) -11914 + (LL) 1084
1D Compatibility (HY) -11600 + (ID) 3550
Total energy: -171159.0 ( -101.28 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3AKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AKE-query.scw
PDB file :
Tito_Scwrl_3AKE.pdb
: