Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLNLEAAQKTVELVEKEHGTGLAVVANVTKQEDIENMINQAIEAFGTLDILVNNAGIMDNFVPAGELTDELWDKVFAINTTGVMRATREALHIFEEKGQGVIVNIASAGGLFGSRA--GAAYTASKHAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTT-IYAPDEFGQERAMIGMGINPRAGDASEIAKVALFLASDDSSFVNGTVITADAGWTAY |
| 3AWD Chain:B ((10-260)) | --RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMG---RVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTVW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145387 for 2196 contacts (-66.2/contact) +
2D Compatibility (PS) -27200 + (NN) -10598 + (LL) 20
1D Compatibility (HY) -16800 + (ID) 4600
Total energy: -204565.0 ( -93.15 by residue)
QMean score : 0.546
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