Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKEAGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAEKYGADQVQKWRRSYDTLPPLLEENDE--RQAKNDRRYQLLDT--HAIPSGENLKVTLERVIPYWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVYELNADLKPVNKYYLDK
2F90 Chain:A ((5-232))
-KLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPH----
General information:
TITO was launched using:
RESULT:
Template:
2F90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84228 for 1854 contacts (-45.4/contact) +
2D Compatibility (PS) -24100 + (NN) -6145 + (LL) 464
1D Compatibility (HY) -18800 + (ID) 5700
Total energy: -138509.0 ( -74.71 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_2F90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F90-query.scw
PDB file :
Tito_Scwrl_2F90.pdb
: