Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELG----DFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDQIDLYLVHWP-------------------KQDT-FFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRL--RTSANVLPVVDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRG----------GVLQEQILIDLAEKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI |
| 2PDJ Chain:A ((7-301)) | ----------LNNGAKMPILGLGTWK-SPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCAA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100379 for 2198 contacts (-45.7/contact) +
2D Compatibility (PS) -28220 + (NN) -13623 + (LL) 1704
1D Compatibility (HY) -24800 + (ID) 5350
Total energy: -170668.0 ( -77.65 by residue)
QMean score : 0.505
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