Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADY---AGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
4RHY Chain:C ((21-201))
----DIKSVLLTAEQIQARIAELGEQIGNDYRETTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSY------SGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ-
General information:
TITO was launched using:
RESULT:
Template:
4RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131649 for 1334 contacts (-98.7/contact) +
2D Compatibility (PS) -18414 + (NN) -6671 + (LL) 248
1D Compatibility (HY) -19600 + (ID) 3850
Total energy: -179936.0 ( -134.88 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_4RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHY-query.scw
PDB file :
Tito_Scwrl_4RHY.pdb
: