Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTKVEEIRSYLIASIQNGKLAPGDRLPSIRQLANQFSCNKDTVQRVLMELRFDNYVYAKPRSGYYVFDSHEEEVEEGVSLPNSEIANIAYDDFRLCLNETLIGREDYLFNYYYRQEGLLDLSKAVAKLMEETGVYVPLDDIVITAGTQQALFILTQVTFPNRKSRVLIEEPTYPRMIELIKTQNLPYETISRGTHGIDFQRLEEIFQTQSIKFFYVIPRMHNPLGTSYNPVEMKRLIEMAEKYDVYIVEDDYMSDFASQS----PLHYYDT---HGRVIYLKSFSKAIFPALRLAAICLPQALKSTFMAYKKLMDYDTNLILQKALALYIENGLYGKNSQYLKYRYQKDLANSKSILADQPN-LPPYSLHHDSVLFDCSKL------DNFKILRQYGDTLENYFCQKSHQSLLQVKNDSCLKQFLGSL |
2ZYJ Chain:A ((35-353)) | ----------------------------------------------------------------------------LSFAGGLPAPELFPKEEAAEAAARILREKGEVALQ-YSPTEGYAPLRAFVAEWIG-----VRPEEVLITTGSQQALDLVGKVFL-DEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEG-FSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172832 for 2468 contacts (-70.0/contact) +
2D Compatibility (PS) -33429 + (NN) -18303 + (LL) 6000
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -235164.0 ( -95.29 by residue)
QMean score : 0.464
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