Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSRKPFIAGNWKMNKNPEEAKAFIEAV-ASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
2YPI Chain:A ((1-238))-ARTFFVGGNFKLNGSKQSIKEIVERLNTASIP--ENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDW--TNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN-


General information:
TITO was launched using:
RESULT:

Template: 2YPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -81625 for 1986 contacts (-41.1/contact) +
2D Compatibility (PS) -25919 + (NN) -12957 + (LL) 436
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -143765.0 ( -72.39 by residue)
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_2YPI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YPI-query.scw
PDB file : Tito_Scwrl_2YPI.pdb: