Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNTVTPKETAGSFINKVLGGTATAIVVALIPNAILATFLKPFLSYGLAAEFLHIVQ------VFQFFTPIMAGFLIGQQFKFTPMQQLAVGGAAYIGSGAWAYTEVIQKGVATGSFQLRGIGDLINMMLTAALAVLAVKWFGNKFGSLTIILLPIIIGTGVGYLGWKLLPYVSYVTTLIGQGINSFTTLQPIAMSILIAMAFSMLIVSPISTVAIGLAIGLNGMSASAASMGVASTTAVLVWATMKANKSGVPIAIALGAMKMMMPNFLKHPVMAIPMLMTATVSSLTVPLFKLVGTPASSGFGLVGAVGPIASFEAGASMLIVILSWLVIPFAVGFVSHKICKDILKLYKDDIFVFEGQN-- |
2F9I Chain:A ((8-327)) | LVPRGSMLDFEKPLFEIRNKIESLQEEIDMLEASLERETKKIYTNLK-PWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQ-QRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFN-------------------------RPIFTFIDTK-----GAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIG-EGGSGGALGIGIANKVLML-------ENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGG-----AHKDIEQQALAIKSAFVAQLDSL----------ESLSRDEIANDRFEKFRNIGSYIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232256 for 2479 contacts (-93.7/contact) +
2D Compatibility (PS) -31519 + (NN) -8219 + (LL) 4380
1D Compatibility (HY) 400 + (ID) 2100
Total energy: -269314.0 ( -108.64 by residue)
QMean score : 0.218
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