Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIAAMEEELKLLVENLEDKSQETVLS-NVYYSGRYGEHELVLVQSGVGKVMSAMSVAILVESFKVDAIINTGSAGAVATGLNVGDVVVADTLVYHDVDLTAFGYDYGQMSMQPLYFHSDKTFVSTFEAVLSKEEMTSKVGLIATGDSFIAGQEKIDVIKGHFPQVLAVEMEGAAIAQAAQATGKPFVVVRAMSDTAAHDANITFDEFIIEAGKRSAQVLMAFLKAL
4FFS Chain:A ((12-235))
-KIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFL----EKSAHTSAKFLKSM
General information:
TITO was launched using:
RESULT:
Template:
4FFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163848 for 1988 contacts (-82.4/contact) +
2D Compatibility (PS) -23844 + (NN) -6404 + (LL) 348
1D Compatibility (HY) -18000 + (ID) 3750
Total energy: -215498.0 ( -108.40 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_4FFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FFS-query.scw
PDB file :
Tito_Scwrl_4FFS.pdb
: