Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTIL-PFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNITD-TSFLIGDGTGR-GS----ANANYFVFEADEYERHFMPYHPEYSIITNIDFDHPDYFT-GLEDVFNAFNDYAKQVQ--KGLFIYGEDSKLHEITSK--APIYYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTEKII-----DDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAK--------IVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 1P3D Chain:A ((18-473)) | -VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVV-TQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIK-DDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYAAGEAP-IVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESW-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -270530 for 3912 contacts (-69.2/contact) +
2D Compatibility (PS) -46717 + (NN) -19917 + (LL) 492
1D Compatibility (HY) -22800 + (ID) 6350
Total energy: -365822.0 ( -93.51 by residue)
QMean score : 0.469
|
|
|