Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQEFEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVK--DQESQDLTEKIEADLMLKGYEVLTDDRNER-VGSKFSDSDLIGLPIRVTVGKKASEGIVEVKIKASGDTIEVHADNLIETLEILTKK------------------------------------------------------------------------------------------ |
1HC7 Chain:A ((5-477)) | ---KGLTPQSQDFSEWYLEVIQKAELADYGPVR----GTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLFSPELAVVTHAG----GEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTR-PFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYA----------------------------------------------------------------------------------------------AIPVIEGLKTEKEK---------FAGAVYTTTIEALM--------------------------------------------------------------------------------------------------------------KDG-------KALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLS-WRFIGAIIMTHGD-------------DRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111928 for 2988 contacts (-37.5/contact) +
2D Compatibility (PS) -39660 + (NN) -6920 + (LL) 14932
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -159576.0 ( -53.41 by residue)
QMean score : 0.360
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