Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEGGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQEEFSK------------TGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISRCQTLPFQPLQPKAIEDRLIE----QD--VSPHMARL---LANMTNNVAEAVELSRN-DEFAE--------SRAKVIKLYEVLHQ----------RKGH--AFFFIQDQWMPFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQILAVLEAKKRLHSNVNVQGLMEHLVLMLQEG |
| 1SXJ Chain:D ((33-352)) | -PKNLDEVT-AQDHAVTVLKKTLKSANLPH-MLFYGPPGTGKTSTILALTKELYGPDLM-----------------KSRILELNAS-DERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDIS--AGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFM---KSGWSAASVVNQLHEYYITNDN------------------------FDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126380 for 1971 contacts (-64.1/contact) +
2D Compatibility (PS) -29909 + (NN) -13017 + (LL) 3084
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -179222.0 ( -90.93 by residue)
QMean score : 0.524
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