Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVL--AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVG--GQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDLLYELCDLIAARDH
3AQC Chain:B ((30-252))------------------------------ETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKD--DLIRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIAT-----INNSK----FHQIFSKTILEVCFGEFDQMAD--RFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDD--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3AQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 895 -252 -0.28 -1.15
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -0.28
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_3AQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AQC-query.scw
PDB file : Tito_Scwrl_3AQC.pdb: