Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceKRLVVQRVTEASVTVDEEVVGQIGQGLMVLVGITHDDTEDDAAYLADKVVNLRIFDDSEGKM-NLSLVDIGGEILSVSQFTLYGDTKKGRRPNYMNAAKPDKALGLYEKWNDLLRE--KGIKVETGTFGAMMDVQLTNSGPVTLIMDSK
2OKV Chain:C ((2-147))-KAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQC-VLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELES-


General information:
TITO was launched using:
RESULT:

Template: 2OKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 645 -48322 -74.92 -337.92
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.81

3D Compatibility (PKB) : -74.92
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_2OKV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OKV-query.scw
PDB file : Tito_Scwrl_2OKV.pdb: