Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDMKHTLLEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVALAETAASAGAQNLIDHTTQACVGLEINANHLKSVKEGTVKAIAEPVHIGRTTIVYHIHIYDEQERLICISRCTLAVIKK
4K4C Chain:B ((18-136))----NTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSM-AGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVL--


General information:
TITO was launched using:
RESULT:

Template: 4K4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 588 -82946 -141.06 -697.03
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -141.06
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_4K4C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K4C-query.scw
PDB file : Tito_Scwrl_4K4C.pdb: