Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLPA-H-PQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNS-VVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT-----MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 4ZRM Chain:A ((4-310)) | --------------MNILVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSGKVENLNRNALFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISV----REPARDAKTNIIGSLVLLEKSIKYGVKKFIFSSTGGAIYGENVKVFPTPETEIP--HPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEK------GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEP--VYKP--P-----------------RK-------GDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEYFRKT------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157401 for 2586 contacts (-60.9/contact) +
2D Compatibility (PS) -32012 + (NN) -15383 + (LL) 5844
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -213502.0 ( -82.56 by residue)
QMean score : 0.430
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