Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAWQDHAEV-SVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCGVPYT--DALPEMPEPAIEVEPPVCD-CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
2H59 Chain:A ((19-227))
-----LTGAGISTPSGIPDFRG-PNGIYKKYSQ-NVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELAGNVEEYYCVRCEKKYTVEDVIKKLESSDV----PLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2H59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75680 for 1631 contacts (-46.4/contact) +
2D Compatibility (PS) -22517 + (NN) -8794 + (LL) 2888
1D Compatibility (HY) -21200 + (ID) 3850
Total energy: -129153.0 ( -79.19 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_2H59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H59-query.scw
PDB file :
Tito_Scwrl_2H59.pdb
: