Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHAIEVTETGGPGVLRHVDQPQPQPGHGELLIKAEAIGVNFIDTYFRSGQYPRE-LPFVIGSEVCGTVEAVGPGVTAADTAISVGDRVVSAS-ANGAYAEFCTAPASLTAKVPDDVTSEVAASALLKGLTAHYLLKSVYPVKRGDTVLVHAGAGGVGLILTQWATHLGVRVITTVSTAEKAKLSKDAGADVVLDYPEDAWQFAGRVRELTGGTGVQAVYDGVGATTFDASLASLAVRGTLALFGAASGPVPPVDPQRLNAAG-SVYLTRPSLFHFTRTGEEFSWRAAELFDAIGSEAITVA--VGGRYPLADALRAHQDLEARKTVGSVVLLP |
| 1QOR Chain:A ((2-327)) | ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGV----KHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILN-QKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226348 for 2845 contacts (-79.6/contact) +
2D Compatibility (PS) -35657 + (NN) -23174 + (LL) 476
1D Compatibility (HY) -22400 + (ID) 7350
Total energy: -314453.0 ( -110.53 by residue)
QMean score : 0.515
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