Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGP-D---GVLRPTHCGATLIAGLD-M--DSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFR-GGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAG---ESLGFT-SGGVRLTRTKTRP-Y----LGDLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
| 1O7J Chain:A ((3-327)) | ----------KLPNIVILATGGTIAGSAATGTQTTGYKAGALGVDTLINAVPEVKKLANVKGEQFSNMASENMTGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHLTVKSDKPVVFVAAMRPATAISADGPMNLLEAVRVAGDKQSRGRGVMVVINDRIGSARYITKTNASTLDTFRANEEGYLGVIIGNRIYYQNRIDKLHTTRSVFDVRGLTSLPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKAL-EKGVVVMR--STRTGNGIVPPDE-------ELPGLVSDSLNPAHARILLMLALTRTSDPKVIQEYFHTY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225360 for 2722 contacts (-82.8/contact) +
2D Compatibility (PS) -33878 + (NN) -20845 + (LL) 256
1D Compatibility (HY) -21600 + (ID) 4450
Total energy: -305877.0 ( -112.37 by residue)
QMean score : 0.509
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