Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDLAGTTRLLRAQGVTAPAGFRAAGVAAGIKASGALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTTGRLRAVILNSGGANACTGPAGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKLLAGVAHVVHEMHGGLVGGDEAAHAIMTTDNVPKQVALHHHDNWTVGGMAKGAGMLAPSLATMLCVLTTDAAAEPAALERALRRAAAATFDRLDIDGSCSTNDTVLLLSSGASEIPPAQADLDEAVLRVCDDLCAQLQADAEGVTKRVTVTVTGAATEDDALVAARQIARDSLVKTALFGSDPNWGRVLAAVGMAP--ITLDPDRISVSFNGAAVCVHGVGAPGAREVDLSDADIDITVDLGVGDGQARIRTTDLSHAYVEENSAYSS
1VZ6 Chain:A ((8-390))-----------------TPRGFVVHTAPVGLADDGRDDFTVLASTAP-ATVSAVFTRSRFAGPSVVLCREAVADGQARGVVVLARNANVATGLEGEENAREVREAVARALG-----LPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGEG--GFDRAARAIMTTDTRPKEVRVSVG-GATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVD-AGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPDDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE---


General information:
TITO was launched using:
RESULT:

Template: 1VZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191728 for 3387 contacts (-56.6/contact) +
2D Compatibility (PS) -41425 + (NN) -20679 + (LL) 1784
1D Compatibility (HY) -17600 + (ID) 6150
Total energy: -275798.0 ( -81.43 by residue)
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_1VZ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VZ6-query.scw
PDB file : Tito_Scwrl_1VZ6.pdb: