Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELK---KDPVSRRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAE---RKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQ-ENDGLDRVKPFRP-FQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
4A8H Chain:A ((1-309)) | MKRDYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKN-KSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGD-ATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDA-SSVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTSIRGLLVYLM--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181254 for 2597 contacts (-69.8/contact) +
2D Compatibility (PS) -33699 + (NN) -25316 + (LL) -92
1D Compatibility (HY) -24800 + (ID) 5650
Total energy: -270811.0 ( -104.28 by residue)
QMean score : 0.641
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