Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRN----YE----AD----------------L--------SAC-----RIPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSP--GGVTLSSGERLAAATVVWCAGMRAS-RL-TEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 4YWO Chain:A ((15-331)) | MHKLAIIGYGAAGFAAMIKANEL---------GVKPVLIGKGE-IGGTCVNVGCVPSKRMLYIAEIYKKAREVTGSEVYPPFSSFQEKDGLVQEMRKTKYEDLLSYYDVELIQGEARFISPHA--VKV-NGQVIEAEKFVIATGSSPLIPRIPGLDKV--GFWTNREALSPD------------RRIDSLAVIGGRALALEFAQMYSRMK-----------VEVAILQRSPVLIPDWEPEASVEARRIMENDGVAVVTGVNVKEVRKGAGKIVITDKGEVEADEILLATGRKPNVDLGLENAGVRLNERGGIKVDDELRT-DNPHIYAAGDVLGGK--------MLEALAGRQGSIATENALTG----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219235 for 2347 contacts (-93.4/contact) +
2D Compatibility (PS) -29313 + (NN) -3600 + (LL) 7660
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -259288.0 ( -110.48 by residue)
QMean score : 0.419
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